I have checked this with a tax specialist. Their opinion: Shopify is not a financial institution, so the VAT exemption on transaction costs does NOT apply.
The following is therefore incorrect:
I learned today that you do not have to file a special vAT declaration if, for example, you upload your monthly Shopify transaction cost report to Dexxter as a purchase invoice. Even though Shopify is registered in Ireland. After all, there is no vAT required on financial transaction costs: https://www.wolterskluwer.com/nl-be/expert-insights/financial-services-subject-to vat in Belgium by 2025
I wonder if I will be able to recover the unnecessarily paid vAT from Intervat…