Foreign invoice with VAT charged and credit note with only the vAT

I received a Dutch invoice on which vAT was charged.
I sent an email stating that vAT should not be charged. I then received a credit note with only the vAT on it. So I have two documents to enter.
– On the invoice, I indicated: vAT paid
– But how can I enter the credit note? Because I got that vAT back?
Or can I adjust this on the invoice (and indicate that I did not pay vAT) and not enter the credit note? (and possibly add a note)